Chris Mungall, computer research scientist in the Environmental Genomics & Systems Biology (EGSB) Division, has been awarded the society’s 2017 Exceptional Contributions to Biocuration Award. EGSB’s bioinformatics scientist Monica Munoz-Torres was recently selected society chair following the 2016-2017 executive committee elections in November.
From a Single Genetic Mutation, Secrets of ‘Boy in the Bubble’ Disease Revealed
Steven Brenner, a biologist faculty scientist in the Environmental Genomics & Systems Biology Division and a UC Berkeley computational biologist, was part of an interdisciplinary, international research team that has identified the rare genetic mutation responsible for a unique case of “boy in the bubble” disease, known as severe combined immunodeficiency (SCID), a deadly immune system disorder. The researchers found that the cause was a mutated version of a gene called BCL11B, which also plays an unexpected role in the normal processes of immune system development.
“This is a gene that had never been associated with SCID before, which required more advanced genome analysis techniques to discover,” said Brenner, co-author of the study, published on December 1 in the New England Journal of Medicine. “Moreover, unlike variants in every other known SCID gene, this mutation is dominant, which means you only need one copy of this mutation to disrupt multiple aspects of development.” Read more at UC Berkeley News.
Biosciences Area FY17 LDRD Projects
The projects of 13 Biosciences Area scientists and engineers received funding through the FY17 Laboratory Directed Research and Development (LDRD) program. The funded projects cover a broad range of topics including the study of microbiomes in relation to their environment, plants, and gut health; catalysis for solar conversion to energy; and genomic expression in tissue. Among them were three projects related to Lab-wide initiatives. Together, these efforts account for 17.5% of the $25.2 million allocated. Lab-wide, a total of 88 projects were selected from a field of 166 proposals.
Berkeley Lab Gets $4.6M in Functional Genomics Catalog Project
The Department of Energy’s Lawrence Berkeley National Laboratory (Berkeley Lab) is set to receive close to $4.6 million over four years as part of an ongoing federally funded project to create a comprehensive catalog for fundamental genomics research. This work will be part of the National Human Genome Research Institute’s Encyclopedia of DNA Elements ENCODE project.
The new Berkeley Lab grant, awarded at more than $1.1 million per year, will be used to establish the Center for In Vivo Characterization of ENCODE Elements (CIViC). It will be one of five characterization centers tasked with investigating how genomic elements function in vivo. CIViC will be led by principal investigators Len Pennacchio and Axel Visel, senior scientists at Berkeley Lab’s Environmental Genomics and Systems Biology Division. Research scientist Diane Dickel will be the center’s project manager. Read more in the Berkeley Lab News Center.
‘Wild Things’: 7 Bacterial, Fungal and Microbial Discoveries
The Biosciences Area launched its Twitter account one year ago. @LBNLBioSci has served as a tool to disseminate the Area’s achievements in energy, environment and health, and has so far attracted 409 followers. To celebrate the one year anniversary, the Biosciences communications team has released a listicle on seven of the Area’s bacterial, fungal and microbial discoveries. Read the listicle here and follow @LBNLBioSci.
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