The projects of 17 Biosciences Area scientists and engineers received funding through the FY22 Laboratory Directed Research and Development (LDRD) program.
Women @ the Lab Awards
Four Biosciences employees were selected by Berkeley Lab leadership and the Women Scientists and Engineers Council (WSEC) for recognition as part of the 2020 Women @ the Lab awards. The biennial program, now in its fourth year, spotlights women at the Lab for meritorious professional contributions, leadership, mentorship, and outreach.
The Paradox of ‘Ultraconserved’ Enhancers: Perfect Sequence Conservation Not Required
The last common ancestor of humans and rodents lived more than 80 million years ago, and billions of changes in their respective DNA sequences have occurred over this vast timespan. Yet, intriguingly, there are a few hundred stretches of DNA in our genome that are still identical to the corresponding sequences in mice and rats. Generally, sequence conservation between distantly related species is an indication that the function the DNA serves is vitally important and highly sensitive to mutations. For example, most DNA sequences that encode proteins show at least moderate conservation in evolution. However, more than two-thirds of the “ultraconserved” sequences shared by humans and rodents are outside of protein-coding genes, raising the question of what led to their extreme level of conservation.
New Protein Functions from Beneficial Human Gut Bacterium
Researchers in the Environmental Genomics and Systems Biology (EGSB) and Biological Systems and Engineering (BSE) Divisions at Berkeley Lab employed a large-scale functional genomics approach to systematically characterize Bacteroides thetaiotaomicron, a beneficial bacterium prevalent in the human gut. They performed hundreds of genome-wide fitness assays and identified new functions for 40 proteins, including antibiotic tolerance, polysaccharide degradation, and colonization of the GI tract in germ-free mice.
JGI, EGSB Team Describe Green Algae Discovery
In PNAS, a research team led by Sabeeha Merchant at UC Berkeley has found numerous examples of polycistronic expression – in which two or more genes are encoded on a single molecule of mRNA – in two species of green algae. Go here to watch a video about the work.
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