It’s a tough job, but someone’s got to do it. In this case, the “job” is the breakdown of lignin, the structural molecule that gives plants strength and rigidity. One of the most abundant terrestrial polymers (large molecules made of repeating subunits called monomers) on Earth, lignin surrounds valuable plant fibers and other molecules that could be converted into biofuels and other commodity chemicals – if we could only get past that rigid plant cell wall.
JGI Researchers Trace the Evolution of Shiitake Mushrooms
These fungi are part of the genus Lentinula, which have evolved to decompose hardwoods on every continent besides Europe and Antarctica. Lentinula mushrooms are white rot fungi, belonging to an elite group of decomposers that can break down all of wood’s components — cellulose, hemicellulose, and the toughest molecule, lignin. Understanding Lentinula genomes and their evolution could provide strategies for converting plant waste into sugars for biofuel production.
Biosciences Area FY23 LDRD Projects
The projects of 22 Biosciences Area scientists and engineers received funding through the FY23 Laboratory Directed Research and Development (LDRD) program.
The JGI Leverages Soil Virus for Insight into Maintaining Microorganisms
Through a collaborative effort, researchers have identified a protein in soil viruses that may promote soil health. The work was enabled in part by a community data portal of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). Using 5,000 images of crystalized samples cloned and synthesized by the JGI, scientists have begun the complex process of uncovering the hidden secrets of soil viruses.
The JGI’s Genomes OnLine Database Celebrates 25 Years of Data Contextualization
Since its launch 25 years ago, the Genomes OnLine Database has matured from six projects on a spreadsheet into a flagship genomic metadata repository, making curated microbiome metadata that follows community standards freely available, and enabling large-scale comparative genomics analysis initiatives.
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