Mobile genetic elements (MGEs) are genetic entities that seek to replicate themselves and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. They can be found in virtually all of Earth’s ecosystems. A software tool recently described in Nature Biotechnology called geNomad identifies and classifies MGEs based upon their gene content and their genetic sequences. The software was created by researchers under the direction of JGI Microbiome Data Science Group Lead Nikos Kyrpides.
JGI Helps Develop Computational Pipeline for RNA Virus Sequences
In the journal Cell, scientists from a team led by researchers at Tel Aviv University in Israel, the National Center for Biotechnology Information, and the DOE Joint Genome Institute (JGI) describe a computational pipeline that can specifically scan for RNA virus sequences.
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