In Nature Ecology and Evolution, researchers from the Chinese Academy of Fishery Sciences, the University of East Anglia, and the JGI have explored the genome of the polar algae Microglena sp. YARC. The green alga harbors extra genes for proteins requiring zinc, and those genes turn out to be key for the phytoplankton’s ability to live in cold polar waters. Learn more here on the JGI website.
At SC21, the HPCwire Editors Choice Award for Best Use of HPC in Life Sciences went to the Berkeley Lab team comprised of JGI and ExaBiome Project team, supported by the DOE Exascale Computing Project. The award recognized the release of MetaHipMer, an end-to-end genome assembler that supports “an unprecendented assembly of environmental microbiomes.
“They produced fantastic scientific results this year by assembling a collection of large datasets that will enable scientists to explore and collect data in new ways,” said JGI Chief Informatics Officer Kjiersten Fagnan of the award. “We’re excited to be able to offer this capability to the JGI user community moving forward and to assemble, for the first time these large environmental microbial data sets for JGI users, which include projects looking at wildfire impacts, carbon cycling, and the microbial dynamics in freshwater lakes over a several year period.”