Researchers have studied both sides of plant-fungi symbiosis in one of the first cross-kingdom spatially-resolved transcriptomics studies to date.
JGI Applies Super-charged Stable Isotope Probing to Fungal Hyphosphere
High-throughput stable isotope probing (SIP) proved to vastly reduce labor and improve results. Applying this method to the study of a particular fungi, researchers identified novel interactions between bacteria and the fungi.
Biosciences Researchers Part of Genomic Analysis of Giant Bacteria Found in Guadeloupe Mangroves
In Science, a team led by Jean-Marie Volland, a scientist with joint appointments at the DOE Joint Genome Institute (JGI) and the Laboratory for Research in Complex Systems, and Silvina Gonzalez-Rizzo and Olivier Gros of the Université des Antilles, described the morphological and genomic features of a giant filamentous bacterium, along with its life cycle.
JGI Helps Reveal Marine Microbe Contains Multitudes
The bacterium SAR324 is unusually cosmopolitan. In the ocean’s North Pacific Subtropical Gyre, microbes tend to stay localized at different depths. But SAR324 can be found throughout the water column, from the warm, well-lit surface, to the blue-lit twilight zone, to the continuous pressure of the dark abyss, 4000 m (2.5 miles) deep. Scientists have wondered, how can SAR324 exist in so many varied environments? Now, a recent study supported by JGI and has uncovered that SAR324 encompasses four subgroups, adapted to different oceanic depths and relying on different ways of living. Read more about the hidden diversity of SAR324 on the JGI website.
Plant Single-cell Solutions for Energy and the Environment Workshop Report Released
On January 23, 2020, Berkeley Lab hosted a workshop on opportunities afforded by single-cell technologies for energy and environmental science, as well as conceptual and technological grand challenges that must be tackled to apply these powerful approaches to plants, fungi and algae. This event, which was spearheaded by Diane Dickel in the Environmental Genomics and Systems Biology Division, brought together a diverse group of leaders in functional genomics technologies from academia, the National Laboratories, and local research institutions.
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